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Thursday, March 31, 2005

Why sex?

Echoed on the Panda's Thumb

Continuing my springtime frolicsome mood, a paper in this week's Nature shows that sex is good for us. Well, not necessarily us as individuals, but as a population. This has actually been a longstanding argument in evolutionary biology—sex is risky, it's hard work, and it is prone to failure. Why not just have women reproduce asexually, and bloom into pregnancy automatically as soon as they hit puberty? That would be much more efficient. Sex also has the problem of breaking up good gene combinations; as you may or may not know, my wife is perfect, but in order to reproduce, she has to water down her flawless genes by combining them with those of a lesser member of the species, me. And then of course, there's the problem of us males. We could instantly double the reproductive capacity of our population if all males were equipped with uteruses and could also bear children. It's a weird, weird system.

So why do we bother with sex? Why aren't we being displaced right now by more fecund asexual populations?

The answer is here in the abstract to the paper:

Why sex evolved and persists is a problem for evolutionary biology, because sex disrupts favourable gene combinations and requires an expenditure of time and energy. Further, in organisms with unequal-sized gametes, the female transmits her genes at only half the rate of an asexual equivalent (the twofold cost of sex). Many modern theories that provide an explanation for the advantage of sex incorporate an idea originally proposed by Weismann more than 100 years ago: sex allows natural selection to proceed more effectively because it increases genetic variation. Here we test this hypothesis, which still lacks robust empirical support, with the use of experiments on yeast populations. Capitalizing on recent advances in the molecular biology of recombination in yeast, we produced by genetic manipulation strains that differed only in their capacity for sexual reproduction. We show that, as predicted by the theory, sex increases the rate of adaptation to a new harsh environment but has no measurable effect on fitness in a new benign environment where there is little selection.

Goddard et al. are working with yeast, and have some powerful tools for cleanly testing the advantages of sex. Yeast will reproduce asexually under good conditions, but when starved, will undergo meiosis and instead reproduce sexually, so they've got the capacity to swing both ways, reproducing either sexually or asexually. The authors genetically engineered a strain of yeast, knocking out two critical genes for meiosis and replacing one with a molecular marker so they can recognize them. That means they now have two identical strains of yeast that differ genetically only at two loci, and that differ physiologically in that one can reproduce sexually, and the other cannot.

Another advantage to yeast is that the parent stock can be frozen and kept indefinitely, so you can put some individuals under selection pressure and allow them to evolve for hundreds or thousands of generations, and still be able to go to the freezer, pull out a sample of their many-times-great-grandparents, and do a comparison of their performance.

So here's the experiment. Take your two strains, one sexual and one asexual, and raise them under different selection pressures. One regime is to throw them into paradise, where there's lots of sugar around and the temperature is pleasant, and there's very little pressure to change. The second regime is to give them a little taste of hell: enough sugar to live but not much surplus, the temperature is raised to something uncomfortable, and a bit of salt is added to make everything unpleasantly briny. Then they're allowed to grow for many generations.

Periodically, samples are taken from each culture, and they are placed together with samples of the ancestral population taken from the freezer, and they are allowed to compete on a dish. What's measured is the ability of each population to outbreed the other; you can assess this by counting the number of colonies each produces relative to the ancestral form.

And here are the results.

yeast fitness
The change in natural logarithm of fitness of asexual and sexual populations of yeast in benign and harsh environments. Points show fitness measurements for individual populations with twice log-likelihood error bars (these approximate 95% confidence limits); the error bars for the benign treatment are plotted but are mostly too small to be discriminated. The fitted model for the harsh environment is plotted for asexual (blue) and sexual (red) treatments (parameters: a1 = 0.761, a2(asexual) = -5.287, a2(sexual) = -4.901). Yellow symbols, asexual strains in the benign environment; green, sexual in the benign environment; blue, asexual in the harsh environment; red, sexual in the harsh environment.

This graph is plotting relative fitness (that is, how much better the yeast are at outbreeding their ancestors) against generation. First, look at the green and yellow dots on the straight line at the bottom of the graph; these are the sexual and asexual strains raised in a yeasty Eden. They are on an even footing with their ancestors and produce equal numbers of colonies in the competition assay; they haven't improved over time at all.

Now look at the blue and red dots. These are the populations that were raised in a harsh environment, and clearly demonstrate that that which does not kill you makes you stronger. Both the asexual and sexual forms have become stronger, faster breeders than their distant ancestors.

What you can also see is that the sexual forms, the red dots, were better adapted than their asexual blue peers. Sex led to better adaptation faster. It looks like a small difference, but as the authors explain, small differences over many generations add up.

By contrast, in the harsh environment, relative fitness increased markedly for both the asexual and sexual populations; after 100 generations the intrinsic rate of increase in the asexual populations exceeded the ancestor by 0.3, but the equivalent figure for the sexual populations was 0.4. Applying Fisher's Fundamental Theorem of Natural Selection this indicates that in the first 100 generations of the experiment there must have been genetic variance in fitness, upon which selection could act, of about 0.003 and 0.004 per generation in the asexual and sexual populations, respectively. This is consistent with the expectation from Weismann's hypothesis that the maintenance of sex is associated with increased variance in fitness. The difference in fitness between the sexual and asexual populations after 100 generations, and indeed throughout most of the experiment, is about 0.1. Although this may not seem a very great advantage, the geometric growth process underlying it quickly leads to large differences in cell numbers. Thus in the 25 mitotic generations between episodes of sex in our experiments, a sexual individual could expect to leave about 12-fold (e0.1x25) as many descendents as an asexual individual. We can also ask whether the rates of evolution in our experiments are unrealistically high. This does not seem to be so, because the 0.3–0.4% variation in fitness we observed is in the lower range of estimates for natural populations of various plants and animals (0.1–30%, with typical values likely to be between 1% and 10%)


Goddard MR, Godfray CJ, Burt A (2005) Sex increases the efficacy of natural selection in experimental yeast populations. Nature 434:636-640.


Trackback url: http://pharyngula.org/index/trackback/2105/1qWPI2cH/

Comments:
#20561: — 03/31  at  09:40 AM
Still yet another superb entry. Thanks.



#20562: — 03/31  at  09:45 AM
" my wife is perfect, but in order to reproduce, she has to water down her flawless genes by combining them with those of a lesser member of the species, me. "

Well technically she doesn't have to combine her genes with yours...

(Sorry for any offence)

/Soren



's avatar #20564: PZ Myers — 03/31  at  09:50 AM
Yeah, but then she'd be diluting them with someone even worse. Breeding for women is kind of like a search for the least offensive dilutant.

PZ Myers
Division of Science and Math
University of Minnesota, Morris



#20565: — 03/31  at  09:56 AM
There are benefits beyond what you mention. Without sex, Falwell, Bush and the religious right would have nothing to rail against (other than evolution, of course). Deprive them of an enemy and we could reduce them to a bowl of quivering Jello. Just think, nothing would be prurient, obscene, or pornographic. Wow! (And another good submission word, "chimera.")



#20566: Douglas — 03/31  at  09:57 AM
Shiver me timbers, the sex posts are very enjoyable in either 'regular' or pirate mode!



#20567: Mrs Tilton — 03/31  at  09:58 AM
See, this is why I don't feel so bad about having let the <i>Nature</i> subscription lapse. When one of those papers comes out that I would really, really be interested in reading, I can count on a least a précis in <i>Pharyngula</i>. And I save the 9O million quid a year they charge for a subscription, and am spared bafflement at papers on quantum entanglement that appear to be written in an encrypted form of Greek.

BTW, you recently plugged one my favourite PopSci books of all time, Dr Tatiana's Sex Advice to All Creation. Judson covers, in a very accessible way, the questions why sex is so damnably inefficient and what possible purpose it can serve, so I'll plug her book again here.



#20568: Mrs Tilton — 03/31  at  10:01 AM
Hey, that's not Parasitoid Godfray listed among the authors, is it? And some say there's no longer any such thing as a renaissance man.



#20569: Michael — 03/31  at  10:01 AM
Sweet! But it's going to be tough for your undergrads to come up with a workable line utilizing this research: "Hey, babe: how 'bout you and me go improve our species' propagation rate?"



#20570: Rory Parle — 03/31  at  10:37 AM
I'm not entirely clear on this result. Are they saying that, in a group of sexually- and asexually-reproducing organisms, those that reproduce sexually do better in the end (or at least their descendants do)? Or are they saying that, given two groups, one of sexually-reproducing organisms, one of asexually-reproducing organisms, the first group will do better?

Really I'm trying to see how this fits in with individual and group selection. In a big pile of different yeasts, would the individuals who had sex come out on top (so to speak)?



#20571: — 03/31  at  10:48 AM
Yet another excellent, readable, enjoyable post... I bet Nature are preparing a lawsuit against you for making them redundant to laymen.



#20572: Les Lane — 03/31  at  10:54 AM
Sex is social security (for future generations).

Why do I get suck with complicated words (stasigenesis)? Oh, I see, it's to improve my vocabulary.



#20573: Rexroths Daughter — 03/31  at  11:07 AM
I think this study also confirms something we've always suspected: misery loves company.



#20577: — 03/31  at  11:39 AM
Zeyl, C. and G. Bell 1997. The advantage of sex in evolving yeast populations. Nature 388: 465-468

I think it's rather interesting they didn't site this paper which claims sex is important for the exactly opposite reason: it purges well adapted populations of deleterious mutation, thus NOT supporting the Weismann effect. It's extra weird because they site another Zeyl paper and several other Bell papers.

I think it might have something to do with the fact that in the new study, 'sexuality' was manipulated genetically, while in the Zeyl and Bell study it was manipulated chemically, i.e. the sexual and asexual populations were the same genetically (except for a neutral marker I think), but the sexual populations underwent special 'sex' treatment every couple days. I've spoken with Zeyl about this and, if I'm remembering correctly, he thinks this was a weakness of his study, but it still seems that the new study would at least mention it??

Regardless, good to see experimental evolution on Pharyngula!



#20581: — 03/31  at  02:48 PM
As an amateur, sexual selection has served me well in lay arguments to rebut the canard that "a tornado in a junkyard will never assemble a 747". My answer has been that evolution is hardly random when you have females in every generation carefully selecting the best performer in their neighborhood. It's more like a bunch of partly-assembled 747's intelligently picking those parts that will improve them the most.

Is it too "just so" to argue that sexual reproduction is that component of natural selection where an organism has to prove itself in the current environment AND also has to choose the best direction to evolve in? In a changing environment, this would seem to be a clever algorithm. A system analyst might say that in each generation, one gender has to prove that the current state works, the other gender has to choose the next incremental change of state. Both are crucial evolution operators, hence two genders.



#20608: — 03/31  at  07:35 PM
This was very interesting, and thanks, PZ, for making available info from journals a lot of us can't afford, or who's schools don't provide.

A question, though. I'm just getting into Ridley's "Red Queen" book, and I'm wondering, after reading this, what ya'll think about that theory. Ridley's inaccurate assertion at the beginning, that all men universally prefer hour-glass women, makes me think he's full of it, since that's not true (a trip to South Africa or a porn store shatters that myth). But the theory itself sounds plausible. This article sounds more plausible.



#20611: — 03/31  at  08:12 PM
Pardon my ambiguity. I meant the Red Queen theory sounds plausible, but Ridley's introduction made me question the rest of the book.



#20619: — 03/31  at  09:32 PM
Zeyl, C. and G. Bell 1997. The advantage of sex in evolving yeast populations. Nature 388: 465-468

I think it's rather interesting they didn't site this paper which claims sex is important for the exactly opposite reason: it purges well adapted populations of deleterious mutation, thus NOT supporting the Weismann effect. It's extra weird because they site another Zeyl paper and several other Bell papers.

It's not the opposite result: more like the other side of the same coin. The increased efficiency in removing deleterious mutations is also a manifestation of the increase in variance in fitness, just as Weismann proposed.



's avatar #20631: PZ Myers — 03/31  at  10:57 PM
I think you guys have all got it right. This is a classic evolutionary story: there are multiple causes—faster response to selective advantages, purging deleterious alleles, and change for change's sake to avoid parasites—all converging to make sex a useful property.

PZ Myers
Division of Science and Math
University of Minnesota, Morris



#20645: — 04/01  at  02:28 AM
Well, if you'll pardon my insatiable anthropomorphic corruption, does this result mean we now have a new term for "switch-hitters": "yeasties"! Now let's just get on to the latest national security threat to "truth, justice and the American way": users of anabolic steroids. Any suggestions?



's avatar #20682: — 04/01  at  02:23 PM
Excelent, clear article, very interesting experiment. It is surprising how well the asexual line adapts to changed conditions. But once an organism discovers sex, it easily outcompetes any asexual: in only 100 mitotic generations the sexual one leaves 22,000 times more descendants. I always knew sex is good, it is the female of the species that seems unconvinced.

Quod natura non sunt turpia



#20977: RPM — 04/04  at  04:18 PM
Intuitively, I'd assume deleterious alleles are purged without burdens on the rest of the genome when sexual reproduction + recombination is allowed. Conversely, advantagous alleles can increase in frequency without dragging deleterious linked variants when we have recombination.

I'm concerned with the effects of the null mutation on fitness. Did they check to see if the meiotic mutant had lower fitness before the experiment began (I'm not sure if the green & yellow dots do this entirely)? It may be impossible to totally untangle the effect of the knockout on the evolution of increased fitness in the harsh environment, but this could underly the fitness differences between the two "selected" classes.



#21019: — 04/05  at  12:27 AM
RPM, the sexual (mitotic) line is the original wild type, and the asexual has been engineered. Do you mean that the knocking out in itself or unknown damaging side-effects could have caused the lower adaptability of the asexual line to harsh conditions?



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